Convert experiment design into reasonable plot panel layout

Convert experiment design into reasonable plot panel layout

design2layout(SE, group_colname = NULL, run_colname = NULL, ...)

Value

list with elements:

• nrow: number of panel rows

• ncol: number of panel columns

• blank_pos: integer vector for blank panels, if any

• Group_ctm: summary info about the panel layout

• isamples: character vector indicating order to plot

Details

This function is in development, and is intended for a specific scenario where an experiment design with optional batch/run can be represented in a sensible layout, with appropriate number of panel columns, and number of panel rows.

See also

Other jam utility functions: cardinality(), color_complement(), convert_PD_df_to_SE(), convert_imputed_assays_to_na(), curate_se_colData(), curate_to_df_by_pattern(), get_numeric_transform(), handle_df_args(), merge_proteomics_se(), rowNormScale()