GeneJam core functions

Functions that assist with gene annotations

freshenGenes()

Freshen gene annotations using Bioconductor annotation data

freshenGenes2()

Freshen gene annotations using Bioconductor annotation data

freshenGenes3()

Freshen gene annotations using Bioconductor annotation data

get_anno_db()

Get annotation database or environment

is_empty()

Test if vector elements are empty

Jam list functions

Functions that operate on list objects

lgsub()

Pattern replacement in a list of character vectors

Jam utility functions

Helpful utility functions

better_exists()

Better exists()

better_get()

Better get()

imget()

Case-insensitive mget()