Quick conversion of hit_array to hit_list

Quick conversion of hit_array to hit_list

Usage

hit_array_to_list(
  hit_array,
  contrast_names = NULL,
  cutoff_names = NULL,
  assay_names = NULL,
  ...
)

Arguments

hit_array

SEStats or list with 'hit_array' element, or array with dimnames(): 'Cutoffs', 'Contrasts', 'Signals'.

contrast_names

character vector of contrasts.

Value

list named by contrast_names, that contains unique statistical hits by combining entries across the cutoff_names and assay_names for each contrast.

Details

This function is mainly useful when there are multiple dimensions unresolved in a hit_array, in which case this function will combine hits across the different cutoffs and signals contained in the hit_array of sestats output from se_contrast_stats().

See also

Other jamses stats: ebayes2dfs(), format_hits(), handle_na_values(), process_sestats_to_hitim(), run_limma_replicate(), save_sestats(), se_contrast_stats(), sestats_to_df(), voom_jam()