Subgraph using Jam extended logic
subgraph_jam(graph, v)igraph object
integer or logical vector indicating the nodes to
retain in the final igraph object.
This function extends the igraph::subgraph() function
to include proper subset of the graph attribute "layout",
which for some unknown reason does not subset the layout
matrix consistent with the subset of igraph nodes.
Other jam utility functions:
avg_angles(),
avg_colors_by_list(),
call_fn_ellipsis_deprecated(),
cell_fun_bivariate(),
collapse_mem_clusters(),
colorRamp2D(),
deconcat_df2(),
display_colorRamp2D(),
enrichList2geneHitList(),
filter_mem_genes(),
filter_mem_sets(),
find_colname(),
get_igraph_layout(),
gsubs(),
handle_igraph_param_list(),
isColorBlank(),
make_legend_bivariate(),
make_point_hull(),
mem_find_overlap(),
order_colors(),
rank_mem_clusters(),
rotate_coordinates(),
subset_mem(),
summarize_node_spacing(),
xyAngle()
Other jam igraph functions:
cnet2df(),
cnet2im(),
cnetplotJam(),
cnetplot_internalJam(),
color_edges_by_nodegroups(),
color_edges_by_nodes_deprecated(),
color_edges_by_nodes(),
color_nodes_by_nodegroups(),
communities2nodegroups(),
drawEllipse(),
edge_bundle_bipartite(),
edge_bundle_nodegroups(),
enrichMapJam(),
fixSetLabels(),
flip_edges(),
get_bipartite_nodeset(),
igraph2pieGraph(),
jam_igraph(),
jam_plot_igraph(),
label_communities(),
layout_with_qfrf(),
layout_with_qfr(),
mem2emap(),
memIM2cnet(),
mem_multienrichplot(),
nodegroups2communities(),
rectifyPiegraph(),
relayout_with_qfr(),
removeIgraphBlanks(),
removeIgraphSinglets(),
reorderIgraphNodes(),
rotate_igraph_layout(),
spread_igraph_labels(),
subsetCnetIgraph(),
subset_igraph_components(),
sync_igraph_communities(),
with_qfr()