Package index
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render_venndir()
- Render venndir output
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signed_overlaps()
- Signed overlaps
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textvenn()
- Text Venn diagram
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venn_meme()
- Venn Meme
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venndir()
- Directional Venn diagram
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counts2setlist()
- venndir conversion from overlap counts to setlist
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im2list()
- Incidence matrix to list
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im_value2list()
- Value incidence matrix to list
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list2im_opt()
- Optimized list to incidence matrix
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list2im_value()
- Convert list to a value incidence matrix
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overlaplist2setlist()
- venndir conversion from overlap list to setlist
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signed_counts2setlist()
- venndir conversion from signed overlap counts to setlist
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JamPolygon-class
- JamPolygon class
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`[`(<JamPolygon>,<ANY>,<ANY>,<ANY>)
plot(<JamPolygon>,<missing>)
rbind2.JamPolygon()
rbind2(<JamPolygon>,<ANY>)
- Subset JamPolygon object
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Venndir-class
- Venndir class
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add_orientation_JamPolygon()
- Define orientation for each polygon, clockwise or counterclockwise
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area_JamPolygon()
- Area for each polygon in JamPolygon
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bbox_JamPolygon()
- Bounding box for JamPolygon
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buffer_JamPolygon()
- Apply buffer outside or inside JamPolygon
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check_JamPolygon()
- Check JamPolygon object
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check_Venndir()
- Check Venndir object
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eulerr_to_JamPolygon()
- Convert eulerr output to JamPolygon
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farthest_point_JamPolygon()
- Get the farthest polygon point from a reference point
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find_venn_overlaps_JamPolygon()
- Find Venn polygon overlaps
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has_point_in_JamPolygon()
- Determine if a point is inside any JamPolygon
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intersect_JamPolygon()
- Intersect one or more JamPolygon objects
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label_fill_JamPolygon()
- Arrange text labels inside a polygon
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label_outside_JamPolygon()
- Position labels outside JamPolygon
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label_segment_JamPolygon()
- Define a label segment for JamPolygon
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labelr_JamPolygon()
- Define label positions for JamPolygon using polylabelr::poi()
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minus_JamPolygon()
- Subtract one or more JamPolygon objects
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nearest_point_JamPolygon()
- Get the nearest polygon point to a reference point
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nudge_JamPolygon()
- Nudge JamPolygon coordinates
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plot(<JamPolygon>)
- Plot JamPolygon object
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point_in_JamPolygon()
- Determine if a point is inside a JamPolygon
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polyclip_to_JamPolygon()
- Convert polyclip polygon to JamPolygon
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polygon_circles()
- Make polygon_list circles
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polygon_ellipses()
- Make polygon_list ellipses
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sample_JamPolygon()
- Sample points within JamPolygon
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split_JamPolygon()
- Split JamPolygon multipart polygons
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union_JamPolygon()
- Union one or more JamPolygon objects
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update_JamPolygon()
- Update attributes for a JamPolygon object
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get_venn_polygon_shapes()
- Get Venn shapes as polygon_list
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simple_ellipse()
- Simple ellipse function
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degrees_to_adj()
- Degrees to text adjustment
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diff_degrees()
- Angular difference in degrees
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display_angles()
- Display degree angles around a unit circle
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mean_degree_arc()
- Mean arc angle in degrees
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mean_degrees()
- Mean angle in degrees
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rescale_coordinates()
- Scale, rotate, and shift numeric coordinates
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spread_degrees()
- Spread angles to minimum degrees difference
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assemble_venndir_label()
- Assemble grid grobs into venndir labels
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plot(<Venndir>,<ANY>)
length(<Venndir>)
setlist(<Venndir>)
names(<Venndir>)
show(<Venndir>)
metadata(<Venndir>)
`metadata<-`(<Venndir>)
overlaplist(<Venndir>)
overlapdf(<Venndir>)
signed_counts(<Venndir>)
im(<Venndir>)
- Plot Venndir object
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curate_venn_labels()
- Curate Venn labels
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expand_range()
- Expand numeric range
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make_color_contrast()
- Make color contrast
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make_venn_combn_df()
- Make full Venn combination data.frame
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make_venn_test()
- Generate test sets for venndir
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match_list()
- Match list elements to another list
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modify_venndir_overlap()
highlight_venndir_overlap()
- Modify Venndir by overlap
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nudge_venndir_label()
- Nudge venndir labels
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print_color_df()
- Print colorized text table
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shrink_df()
- Shrink data.frame by group
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three_point_angle()
- Calculate angle between three consecutive points
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venndir_label_style()
- venndir label style
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venndir_legender()
- Add optional legend to venndir figures (developmental)
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venndir_to_df()
- Convert venndir output to data.frame
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to_basic.GeomRichText()
- Basic function for GeomRichText compatibility with ggplotly
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to_basic.GeomTextBox()
- Basic function for GeomTextBox compatibility with ggplotly